IPAW specifications


Unique identifier OMICS_27381
Alternative name Integrated Proteogenomics Analysis Workflow
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use None
Input format mzML
Operating system Unix/Linux
Programming languages Groovy
Computer skills Advanced
Stability Stable
Docker, Nextflow, Git
Maintained Yes




No version available


  • person_outline Rui Branca
  • person_outline Janne Lehtio

Publication for Integrated Proteogenomics Analysis Workflow

IPAW institution(s)
Department of Oncology-Pathology, Science for Life Laboratory, Karolinska Institutet, Stockholm, Sweden; Department of Biochemistry and Biophysics, The Arrhenius Laboratories for Natural Sciences, Science for Life Laboratory, Stockholm University, Stockholm, Sweden; Department of Oncology-Pathology, NBIS (National Bioinformatics Infrastructure Sweden), Science for Life Laboratory, Karolinska Institutet, Stockholm, Sweden
IPAW funding source(s)
Supported by the Swedish Foundation for Strategic Research, Swedish Cancer Society, Swedish Research Council, Swedish Childhood Cancer Foundation, the Cancer Research Funds of Radiumhemmet, Stockholm’s County Council (ALF funding), and EU FP7 project.

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