IPCAPS specifications

Information


Unique identifier OMICS_22072
Name IPCAPS
Alternative name Iterative Pruning to CApture Population Structure
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input format PLINK,TXT,RDATA
Output data A single directory including textual information about cluster allocations, and visual information such as PC plots and hierarchical trees of group membership.
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 3.0
Computer skills Advanced
Version 0.44.0
Stability Stable
Requirements Matrix, expm, fpc, Rmixmod, LPCM, apcluster, rARPACK, igraph
Maintained Yes

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Documentation


Maintainer


  • person_outline Kristel Van Steen <>

Publications for Iterative Pruning to CApture Population Structure

IPCAPS institution(s)
GIGA-Medical Genomics, University of Liege, Liege, Belgium; Statistical Genetics, Max Planck Institute of Psychiatry, Munich, Germany; Genome Technology Research Unit, National Center for Genetic Engineering and Biotechnology, Thailand; Science Park, Pathum Thani, Thailand; Medical Molecular Biology Research Unit, National Center for Genetic Engineering and Biotechnology, Thailand; Science Park, Pathum Thani, Thailand; Functional Genetics of Infectious Diseases Unit, Institut Pasteur, Paris, France; Centre National de la Recherche Scientifique, URA3012, Paris, France; Instituto de Investiga├žao e Inova├žao em Saude, Universidade do Porto, Porto, Portugal; Instituto de Patologia e Imunologia Molecular da Universidade do Porto, Rua Julio Amaral de Carvalho, Porto, Portugal; WELBIO (Walloon Excellence in Lifesciences and Biotechnology), Wavre, Belgium

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