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IPD specifications

Information


Unique identifier OMICS_03057
Name IPD
Alternative name Immuno Polymorphism Database
Restrictions to use None
Maintained Yes

Maintainer


  • person_outline IPD Team

Publication for Immuno Polymorphism Database

IPD citations

 (4)
library_books

Swine Leukocyte Antigen Diversity in Canadian Specific Pathogen Free Yorkshire and Landrace Pigs

2017
Front Immunol
PMCID: 5350106
PMID: 28360911
DOI: 10.3389/fimmu.2017.00282

[…] 7 SLA-2, and 36 SLA-3) and 145 polymorphic class II alleles (91 DRB1 and 54 DQB1) have been designated by the SLA Nomenclature Committee of the International Society for Animal Genetics (ISAG) in the Immuno Polymorphism Database (IPD)-MHC SLA sequence database.Yorkshire and Landrace pigs are widely distributed in the world. When every country develops breeding according to their need, characterist […]

library_books

An ontology for major histocompatibility restriction

2016
J Biomed Semantics
PMCID: 4709943
PMID: 26759709
DOI: 10.1186/s13326-016-0045-5

[…] MHC developed for the StemNet project, using the well-established MHC nomenclature resources of the international ImMunoGeneTics information system (IMGT, http://www.imgt.org) for human data and The Immuno Polymorphism Database (IPD, http://www.ebi.ac.uk/ipd) for non-human species. It contains 118 terms for MHC across human, mouse, and dog. We were encouraged by the success of MaHCO in expressing […]

library_books

The assembly and characterisation of two structurally distinct cattle MHC class I haplotypes point to the mechanisms driving diversity

2015
Immunogenetics
PMCID: 4539362
PMID: 26227296
DOI: 10.1007/s00251-015-0859-9

[…] re (v2.3.0; http://www.pacb.com/devnet/). Gene content was queried using BLAST (Altschul et al. ) against GenBank, all 114 known cattle MHC class Ia and MHC class Ib cDNA alleles contained within the Immuno Polymorphism Database (IPD-MHC; Release 1.3.0 (18 Nov. 2011)); http://www.ebi.ac.uk/ipd/mhc/bola; (Robinson et al. ), and all of the genes in the extended MHC class I region in the genome assem […]

library_books

Characterising a Microsatellite for DRB Typing in Aotus vociferans and Aotus nancymaae (Platyrrhini)

2014
PLoS One
PMCID: 4018467
PMID: 24820773
DOI: 10.1371/journal.pone.0096973

[…] ent PCR from the same individual, or coming from two different individuals (including previously reported sequences in this category). The alleles found were validated and named by a curator from the Immuno Polymorphism Database (IPD) , .Clustal X software (v2.1) was used for aligning all the MHC-DRB exon 2 and exon 2+ intron 2 sequences , using BioEdit Sequence Alignment Editor software for manua […]

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IPD institution(s)
Anthony Nolan Research Institute, Royal Free Hospital, Pond Street, Hampstead, London, UK

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