ISEScan specifications

Information


Unique identifier OMICS_19519
Name ISEScan
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages Python
License GNU General Public License version 3.0
Computer skills Advanced
Version 1.5.4.3
Stability Stable
Requirements
numpy, scipy, fastcluster, FragGeneScan, HMMER, BLAST, SSW Library, biopython
Maintained Yes

Download


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Versioning


No version available

Maintainers


  • person_outline Haixu Tang
  • person_outline Zhiqun Xie

Publication for ISEScan

library_books

ISEScan: automated identification of Insertion Sequence Elements in prokaryotic genomes.

2017 Bioinformatics
DOI: 10.1093/bioinformatics/btx433
ISEScan institution(s)
School of Informatics and Computing, Indiana University, Bloomington, IN, USA
ISEScan funding source(s)
Supported by National Science Foundation (Grant no: DBI- 1262588).

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