ISHAM ITS Database specifications

Information


Unique identifier OMICS_32676
Name ISHAM ITS Database
Alternative name International Society of Human and Animal Mycology Internal Transcribed Spacer Database
Restrictions to use None
Community driven No
Data access Browse
User data submission Not allowed
Maintained Yes

Maintainer


  • person_outline Wieland Meyer

Publications for International Society of Human and Animal Mycology Internal Transcribed Spacer Database

ISHAM ITS Database citations

 (2)
library_books

Improving taxonomic accuracy for fungi in public sequence databases: applying ‘one name one species’ in well defined genera with Trichoderma/Hypocrea as a test case

2017
PMCID: 5641268
PMID: 29220466
DOI: 10.1093/database/bax072

[…] ce sequences especially valuable (). This has resulted in the release of a number of specialized curated datasets. Examples include FUSARIUM-ID and Fusarium MLST, () addressing Fusarium taxonomy, the ISHAM ITS database of medical fungi () or TrichoBLAST () focused on Trichoderma reference sequences. Other databases such as UNITE () and the RDP Classifier () have a much broader focus on references […]

library_books

The lung mycobiome: an emerging field of the human respiratory microbiome

2015
Front Microbiol
PMCID: 4327734
PMID: 25762987
DOI: 10.3389/fmicb.2015.00089

[…] entification and recently formalized as universal DNA barcode markers for fungi (; ), several projects have been conducted to develop fungal databases, such as ITSDB or UNITE for QIIME released () or ISHAM ITS Database. The later ITS database was recently generated from quality controlled ITS sequences, which represent the actual sequence variation found in each species. Given that fungi represent […]

ISHAM ITS Database institution(s)
Molecular Mycology Research Laboratory, Centre for Infectious Diseases and Microbiology, Sydney Medical School - Westmead Hospital, Marie Bashir Institute for Infectious Diseases and Biosecurity, The University of Sydney, Westmead Millennium Institute, Sydney, NSW, Australia; Division of Hygiene and Medical Microbiology, Medical University of Innsbruck, Innsbruck, Austria; CBS-KNAW Fungal Biodiversity Centre, Utrecht, The Netherlands
ISHAM ITS Database funding source(s)
Supported by in NH&MRC grant #APP1031952.

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