iSNO-AAPair statistics

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iSNO-AAPair specifications

Information


Unique identifier OMICS_05993
Name iSNO-AAPair
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes

Publication for iSNO-AAPair

iSNO-AAPair in publications

 (4)
PMCID: 5647517
PMID: 29062872
DOI: 10.1016/j.dib.2017.09.058

[…] identified, annotation details and searches of these proteins throughout the tools for prediction of s-nitrosylation and tyr-nitration., for s-nitrosylation prediction, freely available tools isno-aapair (http://app.aporc.org/isno-aapair) , gps-sno (http://sno.biocuckoo.org) and snosite (http://csb.cse.yzu.edu.tw/snosite/) were challenged with an olive pollen transcriptome described […]

PMCID: 4204854
PMID: 25333472
DOI: 10.1371/journal.pone.0110232

[…] to predict protein nitration . moreover, several programs and algorithms have been developed to predict cysteine residues that are susceptible to s-nitrosylation, including snosite, isno-pseaac, isno-aapair, and gps-sno 1.0 –., in this study, we used gps-sno 1.0 to identify candidate proteins for s-nitrosylation within the arabidopsis proteome (27,416 proteins). in total, 31,907 […]

PMCID: 4145740
PMID: 25184139
DOI: 10.1155/2014/438341

[…] other methods. the independent testing set contained 113 protein sequences from the latest version of uniprot database (version 2014_05) (see for details). two existing s-nitrosylation predictors, isno-aapair [] and isno-pseaac [], were used for comparison. the comparison results of our predictor, isno-aapair, isno-pseaac, and other five data mining algorithms on the independent testing set […]

PMCID: 4100159
PMID: 24918295
DOI: 10.3390/ijms150610410

[…] dataset, isno-anbpb achieved an accuracy of 63.41% and a mcc of 0.2984, which are much higher than the values achieved by the existing predictors snosite, isno-pseaac, the li et al. algorithm, and isno-aapair. on another training dataset, isno-anbpb also outperformed gps-sno and isno-pseaac in the 10-fold crossvalidation test., protein s-nitrosylation, the covalent attachment of a nitric oxide […]


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iSNO-AAPair institution(s)
Department of Information and Computer Science, University of Science and Technology Beijing, Beijing, China

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