isobar pipeline

isobar specifications


Unique identifier OMICS_02491
Name isobar
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU Lesser General Public License version 3.0
Computer skills Advanced
Version 1.16.0
Stability Stable
Requirements Biobase, stats, methods
Maintained Yes


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  • person_outline Florian P. Breitwieser <>

Publication for isobar

isobar citations

PMCID: 3759844

[…] mtor regulated phosphoproteome [34]. thermo scientific's commercial proteome discoverer enables to construct a workflow from identification to quantitation. as it can be appreciated from the table, isobar's distinguishing features are its statistical fundament for quantitation and significance analysis, the high level integration of public ptm data for report generation, and the configurability […]

PMCID: 3759844

[…] text files only. in the future of the isobar project, we will give significant attention to the development of a graphical user interface., isobar and isobarptm can be downloaded from or from the bioconductor web site., , we thank all our cemm colleagues and in particular andré müller, uwe rix, alexey stukalov, and keiryn bennett for useful feedback and advices. jc […]

isobar institution(s)
CeMM, Center for Molecular Medicine of the Austrian Academy of Sciences, Vienna, Austria

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