ISSD specifications


Unique identifier OMICS_28813
Alternative name Integrated Sequence-Structure Database
Restrictions to use None
Community driven No
Data access Browse
User data submission Not allowed
Maintained No

Publication for Integrated Sequence-Structure Database

ISSD citations


Bacteriophage recombineering in the lytic state using the lambda red recombinases

PMCID: 3815324
PMID: 21910851
DOI: 10.1111/j.1751-7915.2011.00292.x

[…] Genomics, Madison, WI, USA) was used as described in its User Protocol. Briefly, the kit provides primer pairs for PCR detection of IS1, IS2, IS3 (ISEc17), IS4, IS5, IS10, IS30D, IS150, IS186, IS600 (ISsd1), IS609, IS911, ISEc1,3,5, ISEc4, RhsA,B,C and RhsD,E. PCR reactions were carried out using Taq Polymerase (Fermentas, Vilnius, Lithuania) in 25 µl reaction volumes, each containing 0.5 µl of 10 […]


Indications that 'codon boundaries' are physico chemically defined and that protein folding information is contained in the redundant exon bases

PMCID: 1560374
PMID: 16893453
DOI: 10.1186/1742-4682-3-28

[…] ctures in 2D as amino acid residue contact maps []; SeqForm to select sequence residues in predefined phases (every third in our case) []. Structural data were downloaded from PDB [], NDB [], and the Integrated Sequence-Structure Database (ISSD) [].Structures were generally randomly selected regarding species and biological function (a few exceptions are mentioned in the Results). Care was taken t […]

ISSD institution(s)
CRC Biomolecular Structure Unit, The Institute of Cancer Research, Sutton, UK; Department of Molecular Biology, Faculty of Biology, Lomonosov Moscow State University, Moscow, Russia
ISSD funding source(s)
Supported by the Cancer Research Campaign (Programme Grant SP13848SN) and in part by the Russian Fund for Basic Research and by the Royal Society for a fellowship awarded under the ‘Exchanges with the former FSU’ scheme.

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