icTAIR specifications


Unique identifier OMICS_15214
Name icTAIR
Alternative name iterative Contextual Transcriptional Activity Inference of Regulators
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data The target genes of regulators, the gene expression data from a dataset of samples for a given context.
Output data The contextually-refined target gene lists.
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License MIT License
Computer skills Advanced
Version 0.0.1
Stability Stable
Maintained Yes



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  • person_outline Chao Cheng <>

icTAIR article

icTAIR institution(s)
Department of Genetics, Geisel School of Medicine at Dartmouth, Hanover, NH, USA; Institute for Quantitative Biomedical Sciences, Geisel School of Medicine at Dartmouth, Lebanon, NH, USA; School of Electronic Information and Communications, Huazhong University of Science and Technology, Wuhan, Hubei, China; Norris Cotton Cancer Center, Geisel School of Medicine at Dartmouth, Lebanon, NH, USA
icTAIR funding source(s)
This work was supported by the National Institutes of Health Centers of Biomedical Research Excellence grant GM103534, the Dartmouth Clinical and Translational Science Institute under award UL1TR001086, the National Center for Advancing Translational Sciences under award KL2TR001088, the National Natural Science Foundation of China (61571202), the Junior Thousand Talents Program of China and by the Dartmouth-Hitchcock Medical Center Department of Pathology Post-Sophomore Fellowship program.

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