icTAIR specifications

Unique identifier:
OMICS_15214
Software type:
Package/Module
Restrictions to use:
None
Output data:
The contextually-refined target gene lists.
Programming languages:
R
Computer skills:
Advanced
Stability:
Stable
Name:
iterative Contextual Transcriptional Activity Inference of Regulators
Interface:
Command line interface
Input data:
The target genes of regulators, the gene expression data from a dataset of samples for a given context.
Operating system:
Unix/Linux, Mac OS, Windows
License:
MIT License
Version:
0.0.1
Maintained:
Yes

versioning

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icTAIR distribution

download

icTAIR support

Documentation

Maintainer

  • Chao Cheng <>

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Publications

Institution(s)

Department of Genetics, Geisel School of Medicine at Dartmouth, Hanover, NH, USA; Institute for Quantitative Biomedical Sciences, Geisel School of Medicine at Dartmouth, Lebanon, NH, USA; School of Electronic Information and Communications, Huazhong University of Science and Technology, Wuhan, Hubei, China; Norris Cotton Cancer Center, Geisel School of Medicine at Dartmouth, Lebanon, NH, USA

Funding source(s)

This work was supported by the National Institutes of Health Centers of Biomedical Research Excellence grant GM103534, the Dartmouth Clinical and Translational Science Institute under award UL1TR001086, the National Center for Advancing Translational Sciences under award KL2TR001088, the National Natural Science Foundation of China (61571202), the Junior Thousand Talents Program of China and by the Dartmouth-Hitchcock Medical Center Department of Pathology Post-Sophomore Fellowship program.

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