IVA specifications

Information


Unique identifier OMICS_08188
Name IVA
Alternative name Iterative Virus Assembler
Software type Package/Module
Interface Command line interface
Restrictions to use None
Biological technology Illumina
Operating system Unix/Linux
License GNU General Public License version 2.0
Computer skills Advanced
Stability Stable
Maintained Yes

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Maintainer


  • person_outline Martin Hunt <>

IVA article

IVA citation

2018
PMCID: 5758519

[…]  × 300. reads were quality filtered with nesoni clip version 0.126 (https://github.com/victorian-bioinformatics-consortium/nesoni), parameters –min qual 30,–min-length 75 and later assembled with the iterative virus assembler (iva) version 0.11.043 with default parameters. from the assembled contigs, we extracted the contig of length which contained our primer sequences. the quality of the contig […]

IVA institution(s)
Wellcome Trust Sanger Institute, Wellcome Trust Genome Campus, Cambridge, UK
IVA funding source(s)
This work was supported by researchers at the NIHR University College London Hospitals Biomedical Research Centre, the HICF and ICONIC grants [HICF-T5-344/WT098608], the Wellcome Trust [grant 098051], the European Union 7th framework EVIMalaR [to T.O.] and Global Health [grant number OPP1084362 to S.H.O.].

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