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|Alternative name||Integrated Transcription Factor Platform|
|Restrictions to use||None|
- Homo sapiens
- Mus musculus
- Rattus norvegicus
Publications for Integrated Transcription Factor Platform
Investigating the mechanism of hepatocellular carcinoma progression by constructing genetic and epigenetic networks using NGS data identification and big database mining method
[…] Base  (for miRNA-gene regulatory associations), Gene Set Enrichment Analysis (GSEA) , Human Transcription Regulation Interaction database (HTRIdb)  and integrated transcription factor platform (ITFP)  (for TF-gene regulatory associations), and Biological General Repository for Interaction Datasets (BioGRID)  (for protein-protein interactions) databases, in order to construct candidate GE […]
A Genome Scale Investigation of How Sequence, Function, and Tree Based Gene Properties Influence Phylogenetic Inference
[…] number of exons and protein isoforms) through Ensembl BioMart (www.ensembl.org/biomart; last accessed on February 17, 2015) and other curated databases such as PaxDb (), BioGRID (), Yeastract () and ITFP (). For tree-based properties, we used custom Perl scripts to estimate their values from the estimated ML gene tree. […]
A Cytosolic Network Suppressing Mitochondria Mediated Proteostatic Stress and Cell Death
[…] 3xHA tag was added to the C-terminus of Gis2 and Nog2 by integration of a PCR product amplifying from a 3HA-KanMX6 cassette. The primers used for tagging GIS2 were GIS2-3HA-KAN-ITFP (5′-taacgaaactggccatatttccaaggattgtccaaaggctCGGATCCCCGGGTTAATTAA-3′) and GIS2-3HA-KAN-ITRP (5′-taagtgattgttcctttgtttttttcagtggatgtttcacGAATTCGAGCTCGTTTAAAC-3′). The GIS2 sequence was shown in low […]
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