Protocols

Jatropha Genome Database specifications

Information


Unique identifier OMICS_22114
Name Jatropha Genome Database
Restrictions to use None
Community driven No
Data access File download, Browse
User data submission Not allowed
Version 4.5
Maintained Yes

Jatropha Genome Database citation

call_split

Structural characterization of copia type retrotransposons leads to insights into the marker development in a biofuel crop, Jatropha curcas L.

2013
Biotechnol Biofuels
PMCID: 3852365
PMID: 24020916
DOI: 10.1186/1754-6834-6-129
call_split See protocol

[…] ch family was deduced based on multiple alignments of cloned RT sequences. Relative copy number of each family was estimated by the BLAST algorithm using consensus RT sequences as queries against the Jatropha Genome Database available at the Kazusa DNA Research Institute (http://www.kazusa.or.jp/jatropha/). Sequence similarity with an e-value of less than e-20 was considered significant, and hit n […]

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