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JBASE specifications


Unique identifier OMICS_10133
Alternative name Joint Bayesian Analysis of Subphenotypes and Epistasis
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages C++
Computer skills Advanced
Stability Stable
Maintained Yes




No version available


  • person_outline Anna Goldenberg

Publication for Joint Bayesian Analysis of Subphenotypes and Epistasis

JBASE citations


Confinement suppresses instabilities in particle laden droplets

Sci Rep
PMCID: 5550431
PMID: 28794458
DOI: 10.1038/s41598-017-08126-3

[…] ∞ and c s being the ambient and saturated vapor concentration (at 25 °C) respectively. Moreover, suppression of evaporation near the three-phase contact line results in J apex > J base (Fig. ) (JapexJbase≈3). Thus, ΔT apex > ΔT base or T apex < T base (Supplementary Fig. ) which leads to ρ base < ρ apex where ρ: nanofluid density. This creates a toroidal recirculating flow (buoyancy controlled) i […]


Convergent Evidence of Eagle Talons Used by Late Neanderthals in Europe: A Further Assessment on Symbolism

PLoS One
PMCID: 4092065
PMID: 25010346
DOI: 10.1371/journal.pone.0101278

[…] cide with the proximal margin of the keratinous sheath overlying the terminal phalanx of the digit. At Les Fieux (≈45–50 ka) the two white-tailed eagle terminal phalanges, one from stratigraphic unit Jbase that is associated with the Mousterian of Acheulean Tradition industries and the other from the unit I/J, which is associated with the Denticulate Mousterian, exhibit cutmarks in a similar anato […]


Presumed Symbolic Use of Diurnal Raptors by Neanderthals

PLoS One
PMCID: 3293908
PMID: 22403717
DOI: 10.1371/journal.pone.0032856

[…] identified similar marks at Les Fieux, a cave site in southwestern France. These specimens consist of two terminal phalanges of a white-tailed eagle (Haliaetus albicilla), one from stratigraphic unit Jbase and the other from the possibly coeval unit I/J (). Although chronometric dates are lacking for these units, a study of micro-mammalian remains indicates that the Les Fieux eagle phalanges are o […]


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JBASE institution(s)
Department of Computer Science, University of Toronto, Toronto, ON, Canada; Donnelly Centre for Cellular & Biomolecular Research, University of Toronto, Toronto, ON, Canada; Department of Computer Engineering, Antalya International University, Antalya, Turkey; Department of Molecular Genetics, University of Toronto, Toronto, ON, Canada; Unidad de Investigación Médica en Bioquímica, Hospital de Especialidades, IMSS, Mexico City, Mexico; Unidad de Investigación en Epidemiología Clínica, Instituto MeXI'ano del Seguro Social, Mexico City, Mexico; Department of Anthropology, University of Toronto, Mississauga, ON, Canada; Genetics and Genome Biology, Hospital for Sick Children, Toronto, ON, Canada; Banting and Best Department of Medical Research, University of Toronto, Toronto, ON, Canada
JBASE funding source(s)
This work was supported by the SickKids Research Institute (A.G.), by NSERC 386671-1 and CIHR MOP-123526 (to P.M.K.) and by an NSERC CGS-D3 Scholarship (to R.C.). In Mexico, this work was supported by SSA/IMMS/ISSSTE-CONACYT 2010-2, clave 150352, Apoyo Financiero Fundacion IMSS and Fundacion Gonzalo Rio Arronte I, IMSS Scholarship.

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