JContextExplorer specifications


Unique identifier OMICS_14451
Name JContextExplorer
Software type Application/Script
Interface Graphical user interface
Restrictions to use None
Input data Annotated genome
Input format TXT
Output data Representations of context tress
Output format JPG, PNG, EPS
Operating system Unix/Linux, Mac OS, Windows
Programming languages Java
License GNU General Public License version 2.0
Computer skills Medium
Version 3.0
Stability Stable
Requirements BioJava, EpsGraphics
Maintained Yes



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  • person_outline Marc Facciotti <>

Publication for JContextExplorer

JContextExplorer institution(s)
Department of Biomedical Engineering, University of California, Davis, CA, USA; Genome Center, University of California, Davis, CA, USA; Microbiology Graduate Group, University of California, Davis, CA, USA
JContextExplorer funding source(s)
This work was supported by the NSF FE-094953 and startup funds to MTF

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