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JEPETTO | A Cytoscape plugin for gene set enrichment and topological analysis based on interaction networks

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Performs integrated gene set analysis using information from interaction, pathways and processes databases. JEPETTO uses the TopoGSA server to identify topological analogies between the user selected gene set and the known pathways and processes.

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JEPETTO forum

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JEPETTO classification

  • Animals
    • Homo sapiens

JEPETTO specifications

Unique identifier:
OMICS_02247
Interface:
Graphical user interface
Operating system:
Unix/Linux, Mac OS, Windows
Computer skills:
Medium
Requirements:
Cytoscape
Software type:
Package/Module
Restrictions to use:
None
Programming languages:
Java
Stability:
Stable
Maintained:
Yes

JEPETTO distribution

versioning

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No versioning.

JEPETTO support

Documentation

Credits

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Publications

Institution(s)

Institute of Systems and Synthetic Biology, University of Evry Val-d'Essonne,Evry, France; School of Computing Science, Newcastle University, Newcastle, UK

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