jORCA statistics

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Citations per year

Number of citations per year for the bioinformatics software tool jORCA
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Tool usage distribution map

This map represents all the scientific publications referring to jORCA per scientific context
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Associated diseases

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Protocols

jORCA specifications

Information


Unique identifier OMICS_13268
Name jORCA
Software type Application/Script
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages Java
License GNU General Public License version 3.0
Computer skills Medium
Stability Stable
Requirements
JVM
Maintained Yes

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Versioning


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Maintainer


  • person_outline Oswaldo Trelles

Publication for jORCA

jORCA citations

 (3)
library_books

mORCA: ubiquitous access to life science web services

2018
BMC Genomics
PMCID: 5771032
PMID: 29338691
DOI: 10.1186/s12864-018-4439-x

[…] h use large amounts of data and could entail long processing times.Several tools are available for registering, browsing, discovering, and invoking services from different metadata repositories (e.g. jORCA [], MOWServ [], Taverna [], Seahawk [], and EMBL-EBI []). Overall, existing solutions target only personal computers (i.e. the platforms that were available when they were implemented). Such sol […]

library_books

Workflows for microarray data processing in the Kepler environment

2012
BMC Bioinformatics
PMCID: 3431220
PMID: 22594911
DOI: 10.1186/1471-2105-13-102

[…] e usually inaccessible for modification and extension. Also, upload of large datasets to the servers can be slow and problematic.A third option is the use of other workflow systems (e.g. Taverna: []; jORCA: []). Workflow systems generally share many properties (for review, see [,]). Hence, selection of a system may rely on specific features of the system. Taverna has been used for many bioinformat […]

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The 2nd DBCLS BioHackathon: interoperable bioinformatics Web services for integrated applications

2011
J Biomed Semantics
PMCID: 3170566
PMID: 21806842
DOI: 10.1186/2041-1480-2-4
call_split See protocol

[…] r use-cases were developed spanning three general domains of genomics data.To address the use cases outlined in the Table , developers of the end-user client tools ANNOTATOR, Galaxy, BioMart, TogoDB, jORCA and Taverna presented the features of their projects at the BioHackathon and how they might be utilized to solve the use cases, and then collaboratively worked toward resolution for each. The fo […]


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jORCA institution(s)
Computer Architecture Department, University of Malaga, Málaga, Spain
jORCA funding source(s)
Instituto Nacional de Bioinformática (INB) (http://www.inab.org) a platform of Genoma-España and the EU project ‘Advancing Clinico-Genomic Trials on Cancer’ (EU-contract no.026996).

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