jQMM specifications


Unique identifier OMICS_17635
Name jQMM
Alternative name JBEI Quantitative Metabolic Modeling
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages Python
Computer skills Advanced
Stability Stable
Maintained Yes



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  • person_outline Hector Garcia Martin <>

Publication for JBEI Quantitative Metabolic Modeling

jQMM institution(s)
Biological Systems and Engineering Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA; Joint BioEnergy Institute, Emeryville, CA, USA; Department of Chemical and Biomolecular Engineering, University of California, Berkeley, CA, USA; Department of Bioengineering, University of California, Berkeley, CA, USA; Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA; School of Energy Science and Engineering, Indian Institute of Technology (IIT), Kharagpur, India; Novo Nordisk Foundation Center for Biosustainability, Technical University of Denmark, Hørsholm, Denmark; DOE Agile BioFoundry, Emeryville, CA, USA; BCAM, Basque Center for Applied Mathematics, Bilbao, Spain
jQMM funding source(s)
This work was part of the DOE Joint BioEnergy Institute supported by the U. S. Department of Energy, Office of Science, Office of Biological and Environmental Research, and was part of the Agile BioFoundry supported by the U.S. Department of Energy, Energy Efficiency and Renewable Energy, Bioenergy Technologies Office, through contract DE-AC02-05CH11231 between Lawrence Berkeley National Laboratory and the U. S. Department of Energy. This research is also supported by the Basque Government through the BERC 2014-2017 program and by Spanish Ministry of Economy and Competitiveness MINECO: BCAM Severo Ochoa excellence accreditation SEV-2013-0323.

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