JSim statistics

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JSim specifications

Information


Unique identifier OMICS_21416
Name JSim
Software type Application/Script
Interface Graphical user interface
Restrictions to use None
Operating system Unix/Linux, Mac OS, Windows
Programming languages Java
Computer skills Medium
Version 2.17
Stability Stable
Source code URL http://www.physiome.org/jsim/download/source.html
Maintained No

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Publication for JSim

JSim in publications

 (2)
PMCID: 4696653
PMID: 26716837
DOI: 10.1371/journal.pone.0145621

[…] hinch model. however, we were able to ignore prompts warning of unit inconsistencies during the merging process because the two simulation platforms we planned to use for validating our merged model—jsim [] and opencor []—support automatic unit conversion. once our final merged semsim models were generated, we converted them into cellml using semgen’s semsim-to-cellml translation function […]

PMCID: 4259112
PMID: 25538939
DOI: 10.3389/fbioe.2014.00061

[…] is libroadrunner, a highly performant c++ library for the simulation of sbml models, which provides automatically generated language-bindings to python (sauro et al., )., the java-based tool jsim has been designed for building quantitative numeric models as well as the analysis of these models based on given experimental data (butterworth et al., ). it supports odes and pdes, discrete […]


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JSim institution(s)
Department of Bioengineering, University of Washington, Seattle, WA, USA
JSim funding source(s)
Supported by NIH grants HL9719, RR1243, EB1273, HL073598, EB8407, and GM094503 and NSF grant 0506477.

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