jSplice specifications


Unique identifier OMICS_11364
Name jSplice
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use None
Input data Some RNA-seq reads from paired experiments.
Input format BAM, BED
Output data DAT, BED
Operating system Unix/Linux
Programming languages Python
License GNU General Public License version 3.0
Computer skills Advanced
Version 1.0.3
Stability Stable
Requirements Bedtools, SAMtools
Maintained Yes



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  • person_outline Wilhelm Krek <>

Publication for jSplice

jSplice institution(s)
Institute of Molecular Health Sciences, ETH Zurich, Zurich, Switzerland
jSplice funding source(s)
A postdoctoral fellowship from the European Molecular Biology Organization (EMBO); a grant from the Swiss National Science Foundation

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