Juicer specifications

Unique identifier:
OMICS_13559
Interface:
Command line interface
Operating system:
Unix/Linux, Mac OS, Windows
Parallelization:
CUDA, Other
Computer skills:
Advanced
Requirements:
GNU CoreUtils, BWA, CUDA, Java SDK, Apache Ant, OpenLava, LSF, SLURM, GridEngine
Software type:
Pipeline/Workflow
Restrictions to use:
None
Programming languages:
Java, Perl, Shell (Bash)
License:
MIT License
Stability:
Stable
Maintained:
Yes

versioning

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Juicer distribution

download

Juicer support

Documentation

Maintainer

  • Aiden E.L. <>

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Credits

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Publications

Institution(s)

The Center for Genome Architecture, Baylor College of Medicine, Houston, TX, USA; Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, USA; Department of Computer Science and Department of Computational and Applied Mathematics, Rice University, Houston, TX, USA; Broad Institute of Harvard and Massachusetts Institute of Technology (MIT), Cambridge, MA, USA; John A. Paulson School of Engineering and Applied Sciences, Harvard University, Cambridge, MA, USA; Broad Institute of Harvard and Massachusetts Institute of Technology (MIT), Cambridge, MA, USA; Center for Theoretical Biological Physics, Rice University, Houston, TX, USA; Department of Biology, Massachusetts Institute of Technology (MIT), Cambridge, MA, USA; Department of Systems Biology, Harvard Medical School, Boston, MA, USA

Funding source(s)

This work was supported by an NSF Graduate Research Fellowship (DGE0946799 and DGE1144152), an NIH New Innovator Award (OD008540-01), an NSF Physics Frontier Center (PHY-1427654, Center for Theoretical Biological Physics), an NHGRI CEGS (HG006193), NVIDIA, IBM, Google, a CPRIT Scholar Award (R1304), a McNair Medical Institute Scholar Award, and the President’s Early Career Award in Science and Engineering, and an NHGRI grant (HG003067).

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