JUMPm specifications

Information


Unique identifier OMICS_29913
Name JUMPm
Alternative name Jumbo Mass Spectrometry-based Proteomics metabolomics
Software type Pipeline/Workflow
Interface Command line interface
Restrictions to use Academic or non-commercial use
Output data The metabolite feature, the formula table, the Spectrum-match table, the Structure table and Intermediate files.
Operating system Unix/Linux
Programming languages Java, Perl, R
Computer skills Advanced
Stability Stable
Requirements
Parallel::ForkManager; Class::Std; Statistics::R; Statistics::Basic; Statistics::Descriptive; Set::Partition; Regexp::Common; Number::Format
Maintained Yes

Versioning


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Maintainers


  • person_outline Xusheng Wang <>
  • person_outline Junmin Peng <>

Publication for Jumbo Mass Spectrometry-based Proteomics metabolomics

JUMPm institution(s)
St. Jude Proteomics Facility, St. Jude Children's Research Hospital, Memphis, TN, USA; Department of Structural Biology, St. Jude Children's Research Hospital, Memphis, TN, USA; Department of Computational Biology, St. Jude Children's Research Hospital, Memphis, TN, USA; Department of Developmental Neurobiology, St. Jude Children's Research Hospital, Memphis, TN, USA
JUMPm funding source(s)
Partially supported by National Institutes of Health grant R01AG047928, R01GM114260, R01AG053987, and ALSAC (American Lebanese Syrian Associated Charities).

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