Junction-Explorer specifications

Unique identifier:
OMICS_16329
Restrictions to use:
None
Input format:
bpseq, CT, vienna dot-bracket
Computer skills:
Advanced
Maintained:
Yes
Interface:
Application programming interface
Input data:
An RNA sequence and its secondary structure.
Output data:
The web server displays a table for each identified junction. (If no junction is identified, the web server displays a message indicating so.)
Stability:
Stable

Junction-Explorer support

Documentation

Maintainer

  • Tamar Schlick <>

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Publications

Institution(s)

Department of Chemistry, Courant Institute of Mathematical Sciences, New York University, NY, USA; Bioinformatics Program and Department of Computer Science, NJ, USA

Funding source(s)

This project was funded by the National Science Foundation (EMT award CCF-0727001, grant IIS-0707571) and the National Institutes of Health (grant R01-GM081410).

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