KalignP specifications


Unique identifier OMICS_33106
Name KalignP
Interface Web user interface
Restrictions to use None
Input data Some sequences.
Input format FASTA
License GNU General Public License version 2.0
Computer skills Basic
Stability Stable
Maintained Yes


No version available


  • person_outline Arne Elofsson

Publication for KalignP

KalignP citation


KalignP: Improved multiple sequence alignments using position specific gap penalties in Kalign2

PMCID: 3106193
PMID: 21505030
DOI: 10.1093/bioinformatics/btr235

[…] KalignP inherits the syntax of Kalign2 but extends its functionality for protein sequence alignment. The ESPSGP can be supplied in the Enhanced Fasta format (see Supplementary Material) so that gap pe […]

KalignP institution(s)
Department of Biochemistry and Biophysics, Stockholm Bioinformatics Center, Center for Biomembrane Research, Swedish e-science Research Center, Stockholm University, Stockholm, Sweden
KalignP funding source(s)
Supported by the Swedish Research Council (VR-NT 2009-5072, VR-M 2007-3065); SSF (the Foundation for Strategic Research); the EU 7’th Framework Program by support to the EDICT project (contract No: FP7-HEALTH-F4-2007-201924).

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