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KDBI specifications


Unique identifier OMICS_00539
Alternative name Kinetic Data of Bio-molecular Interaction database
Restrictions to use None
Maintained Yes

Publications for Kinetic Data of Bio-molecular Interaction database

KDBI citations


KID an algorithm for fast and efficient text mining used to automatically generate a database containing kinetic information of enzymes

BMC Bioinformatics
PMCID: 2912889
PMID: 20626859
DOI: 10.1186/1471-2105-11-375

[…] rmation about enzymes and their characteristics like e.g. BRENDA [-] with currently 92,291 entries for KM, 32,484 for kcat, 21,833 for Ki and 33,372 for specific activity [], Kinetikon [], KMedDB [], KDBI [], DOQCS [], SABIO-RK [] and IUPAC-kinetic [], respectively. However, these databases are far from complete, forcing scientists to a time consuming manual extraction of values from the literatur […]


Parameter estimate of signal transduction pathways

BMC Neurosci
PMCID: 1775046
PMID: 17118160
DOI: 10.1186/1471-2202-7-S1-S6

[…] n interaction often provide only dissociation constants, i.e. values describing an equilibrium state that offer only partial information about the dynamics of the reaction. To our knowledge, only the KDBI database [,] was specifically created to store binding and dissociation rate constants. Other repositories, such as MINT [,] and BIND [,] offer few examples of dissociation constants. On the othe […]

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KDBI institution(s)
Department of Computational Science, National University of Singapore, Blk, Singapore

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