kmer project statistics

To access cutting-edge analytics on consensus tools, life science contexts and associated fields, you will need to subscribe to our premium service.

Subscribe
info

Citations per year

Citations chart
info

Popular tool citations

chevron_left Prediction-Based Taxonomic chevron_right
Popular tools chart
info

Tool usage distribution map

Tool usage distribution map
info

Associated diseases

Associated diseases

kmer project specifications

Information


Unique identifier OMICS_11037
Name kmer project
Software type Package/Module
Interface Command line interface
Restrictions to use None
Output data Graphics and distance matrices obtained during analysis
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
Computer skills Advanced
Stability Stable
Maintained Yes

Versioning


Add your version

Documentation


Maintainer


  • person_outline Veronika Dubinkina <>

Publication for kmer project

kmer project in publication

PMCID: 5745018
PMID: 29187708
DOI: 10.1264/jsme2.ME17132

[…] from further analyses ()., the 11-nt k-mers were counted using the shortkmercounter.jar program, and dissimilarities between metagenomic libraries were calculated using the custom r script of the “kmer project” software package (). bray-curtis dissimilarity matrices among the shotgun metagenomic libraries were calculated from the k-mer profiles using the vegan package in the r-environment […]


To access a full list of publications, you will need to upgrade to our premium service.

kmer project institution(s)
Research Institute of Physico-Chemical Medicine, Moscow, Russia; Moscow Institute of Physics and Technology (State University), Dolgoprudny, Russia; ITMO University, St Petersburg, Russia
kmer project funding source(s)
Russian Scientific Foundation (project #15-14-00066); Ministry of Education and Science of the Russian Federation (RFMEFI57514X0075); the Government of Russian Federation, Grant 074-U01

kmer project reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review kmer project