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kruX specifications


Unique identifier OMICS_04593
Name kruX
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages MATLAB, Python, R
License GNU General Public License version 2.0
Computer skills Advanced
Stability Stable
Maintained Yes


No version available


Publication for kruX

kruX citation


Fine mapping analysis revealed complex pleiotropic effect and tissue specific regulatory mechanism of TNFSF15 in primary biliary cholangitis, Crohn’s disease and leprosy

Sci Rep
PMCID: 4979016
PMID: 27507062
DOI: 10.1038/srep31429

[…] in each haplotype, we used quanto version 1.2.4., associations between snp genotypes and gene expression were evaluated using kruskal-wallis test on geometric mean intensity values implemented in r krux package., we first determined the critical region of the tnfsf15 locus that contained the snps and indels in high linkage disequilibrium (ld, r2≥0.8) with rs6478108 and rs4979462 using the ld […]

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kruX institution(s)
School of Life Sciences - LifeNet, Freiburg Institute for Advanced Studies (FRIAS), University of Freiburg, Freiburg, Germany

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