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L2L specifications


Unique identifier OMICS_18897
Name L2L
Restrictions to use None
Community driven No
Data access File download, Browse
User data submission Not allowed
Version 2007.1
Maintained No


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Publication for L2L

L2L citations


Growth and development of skeletal anomalies in diploid and triploid Atlantic salmon (Salmo salar) fed phosphorus rich diets with fish meal and hydrolyzed fish protein

PLoS One
PMCID: 5864013
PMID: 29566030
DOI: 10.1371/journal.pone.0194340

[…] uncle as index of shortened trunk (STR) and shortened tail area (STA) following Taylor et al. [].Lower jaw deformations were recorded and assessed by calculating the lower jaw index (LJI) [,] as: LJI=L2L1 where L1 and L2 represent the distance (pixels) between the articulation point of the pectoral fin and the tips of the upper and lower jaws, respectively. […]


Dimensional stability of two impression materials after a 6 month storage period

PMCID: 5724799
PMID: 29242816
DOI: 10.1080/23337931.2017.1401933

[…] he impressions were made in order to calculate the dimensional change. The percentage of dimensional change for each specimen was calculated according to the formula presented by ISO 4823:2000:ΔL=(L1-L2L1)×100where L1 represents the distance measured between the two vertical lines (4 and 5) on the mold and L2 represents the distance measured between the vertical lines (4 and 5) on the samples.The […]


On the Ribosomal Density that Maximizes Protein Translation Rate

PLoS One
PMCID: 5115748
PMID: 27861564
DOI: 10.1371/journal.pone.0166481

[…] a very short RFMR with 2 or 3 sites.Fact 1 For an RFMR with n = 2 the optimal values are s* = 1 and R*=λ1λ2(λ1+λ2)2.(7) For an RFMR with n = 3 the optimal translation rate satisfies the equation: 2λ1λ2λ3(R*)3/2+(λ1λ2+λ1λ3+λ2λ3)R*-λ1λ2λ3=0.(8)It is interesting to understand how the steady-state densities along the mRNA change as the total density along the circular mRNA varies slightly from the op […]


Whole transcriptome profiling of patient derived xenograft models as a tool to identify both tumor and stromal specific biomarkers

PMCID: 4991491
PMID: 26980748
DOI: 10.18632/oncotarget.8014

[…] t achieved the highest ESTIMATE stromal score was chosen for downstream analyses. Where required, mouse genes names were converted to human and vice versa using MammalHom (http://depts.washington.edu/l2l/mammalhom.html). […]


The First Papillomavirus Isolated from Vulpes vulpes (VvulPV1) Is Basal to the Gammapapillomavirus Genus

Genome Announc
PMCID: 4395052
PMID: 25792048
DOI: 10.1128/genomeA.00111-15

[…] PV structure: an upstream regulatory region, the early genes E6, E7, E1, and E2, and the late ones, L2 and L1, and misses any E5 gene (). Maximum likelihood phylogenetic analyses, all using the E1E2, L2L1, or E1E2L2L1 gene concatenates, place VvulPV1 as a basal sister taxon to the Gammapapillomavirus (GammaPV) genus, at the nucleotide and amino acid levels. GammaPV is the largest, and still expand […]


Reverse causal reasoning: applying qualitative causal knowledge to the interpretation of high throughput data

BMC Bioinformatics
PMCID: 4222496
PMID: 24266983
DOI: 10.1186/1471-2105-14-340

[…] ivity; many pathways are regulated by post-translational events such as protein modification or binding, and only secondarily by protein abundance.Experimental result-based gene sets, for example the L2L, GeneSigDB, and MsigDB chemical and genetic perturbations (CGP) gene sets [-], do not evaluate differentially expressed RNAs based on the function of the proteins they encode, but rather by a comm […]

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L2L institution(s)
Department of Biochemistry, University of Washington, Seattle, WA, USA

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