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|Alternative name||Linear Analysis of Chemical Shifts|
|Interface||Web user interface|
|Restrictions to use||None|
Publication for Linear Analysis of Chemical Shifts
PINE SPARKY.2 for automated NMR based protein structure research
[…] s the status file from the URL associated with the Key, and the PINE web server updates the status of the PINE job in the status file. Predictions of secondary structures (PECAN), referencing errors (LACS), hydrophobicities (PACSY), torsion angles and flexibilities (TALOS-N), and 3 D structures (CS-ROSETTA) are executed sequentially by BASH and PYTHON scripts based on the chemical shifts with the […]
Integrative NMR for biomolecular research
[…] Linear Analysis of Chemical Shifts (LACS) is supported by NMRFAM-SPARKY (two-letter-code lv); LACS detects and corrects errors in chemical shift referencing (Wang et al. ). ARECA (Assessment of the REliability of Chemical shift Assignme […]
An Amphipathic α Helix Controls Multiple Roles of Brome Mosaic Virus Protein 1a in RNA Replication Complex Assembly and Function
[…] equences are available from the National Magnetic Resonance Facility at Madison. Automatically generated peak lists from HIFI were used as input to the automated assignment package suite (PISTACHIO , LACS , and PECAN . 3D 15N-edited 1H-1H NOESY and 3D 13C-edited 1H-1H NOESY spectra were used as input for the ATNOS/CANDID/CYANA suite of programs ,,. The Protein Structure Validation Software suite o […]
The Center for Eukaryotic Structural Genomics
[…] uns yield reliable backbone assignments for more than 90% of the amino acid residues and reliable side chain assignments with greater than 75% completeness. The assigned data are then run through the LACS  (Linear Analysis of Chemical Shifts) software, which corrects possible referencing problems and identifies assignment outliers. The software package PECAN  (Protein Energetic Conformational […]
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