LAITOR statistics

Tool stats & trends

Looking to identify usage trends or leading experts?

Protocols

LAITOR specifications

Information


Unique identifier OMICS_05240
Name LAITOR
Alternative name Literature Assistant for Identification of Terms co-Occurrences and Relationships
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages PHP
Database management system MySQL
License GNU General Public License version 2.0
Computer skills Advanced
Stability Stable
Requirements
LAITOR, MySQ
Maintained Yes

Versioning


No version available

Maintainer


  • person_outline J Miguel Ortega

Publication for Literature Assistant for Identification of Terms co-Occurrences and Relationships

LAITOR citations

 (5)
library_books

Networks Models of Actin Dynamics during Spermatozoa Postejaculatory Life: A Comparison among Human Made and Text Mining Based Models

2016
Biomed Res Int
PMCID: 5013236
PMID: 27642606
DOI: 10.1155/2016/9795409

[…] n” or “phosphorylation”) to be found in the cooccurrence analysis, as text mining engine to extract sentences with cooccurring bioentities from the text of the PubMed abstracts requested that it uses LAITOR (Barbosa altro). P_SAN was created by using the list of PMIDs of the papers we have manually selected for the realization of HM_SAN. […]

library_books

Text Mining for Protein Docking

2015
PLoS Comput Biol
PMCID: 4674139
PMID: 26650466
DOI: 10.1371/journal.pcbi.1004630

[…] lection of semantically annotated documents) has been specifically designed for testing NLP approaches []. PESCADOR extracts a network of interactions from a user-provided set of PubMed abstracts []. LAITOR can further filter this mined interactome according to the specific user needs []. CRAB extracts data from MEDLINE abstracts, which are relevant to tumor-related chemicals posing risk to human […]

library_books

Large Scale Structure of a Network of Co Occurring MeSH Terms: Statistical Analysis of Macroscopic Properties

2014
PLoS One
PMCID: 4090190
PMID: 25006672
DOI: 10.1371/journal.pone.0102188

[…] ge. A plethora of applications have been developed exploiting co-occurrence for mining interesting patterns in biomedical resources (e.g., BITOLA , iHOP , AliBaba , EBIMed , FACTA , PLAN2L , STRING , LAITOR ).Analyzing big relational datasets requires innovative methodological approaches beyond the basic exploratory mining. Recent years have seen an increasing interest in the study of large, real- […]

call_split

Systems Biology Elucidates Common Pathogenic Mechanisms between Nonalcoholic and Alcoholic Fatty Liver Disease

2013
PLoS One
PMCID: 3596348
PMID: 23516571
DOI: 10.1371/journal.pone.0058895
call_split See protocol

[…] arrying out terms' tagging, a total of 228 gene/protein terms were identified for AFLD () and 314 terms were found for NAFLD ().Of note, the data mining method implemented in PESCADOR is based on the LAITOR (Literature Assistant for Identification of Terms co-Occurrences and Relationships) tool that ensures the users the analysis of the meaning of the text, not just the presence of key words. Act […]

library_books

Preimplantation development regulatory pathway construction through a text mining approach

2011
BMC Genomics
PMCID: 3287586
PMID: 22369103
DOI: 10.1186/1471-2164-12-S4-S3

[…] ficantly smaller. However, the verification of all the interactions highlighted by the tool is essential. Text-mining is not able to eliminate the selection of false interaction pairs; in the case of LAITOR (contained in the PESCADOR platform), the type 3 and 4 interactions can present genes with no association specified in the text [].The text-mining data contribute the complete description of th […]

Citations

Looking to check out a full list of citations?

LAITOR institution(s)
Laboratório de Biodados, Dpto de Bioquímica e Imunologia, ICB - UFMG, Belo Horizonte - MG, Brazil

LAITOR reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review LAITOR