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DNASTAR Lasergene specifications

Information


Unique identifier OMICS_01811
Name DNASTAR Lasergene
Alternative name Lasergene complete suite
Software type Package/Module
Interface Command line interface
Restrictions to use License purchase required
Operating system Unix/Linux
License Commercial
Computer skills Advanced
Stability Stable
Maintained Yes

Versioning


No version available

DNASTAR Lasergene citations

 (643)
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Understanding the ontogeny and succession of Bacillus velezensis and B. subtilis subsp. subtilis by focusing on kimchi fermentation

2018
Sci Rep
PMCID: 5935750
PMID: 29728638
DOI: 10.1038/s41598-018-25514-5
call_split See protocol

[…] sharing no significant homology with other B. subtilis group strains were designated PCR targets. The specific primers used for B. velezensis and B. subtilis subsp. subtilis were generated using the DNASTAR Lasergene primerselect module (version 7.0) (TableĀ ). Primer synthesis was performed by the Bioneer Corporation (Daejeon, Korea). Each primer set amplifies a specific DNA fragment from only th […]

library_books

Analysis of 182 cerebral palsy transcriptomes points to dysregulation of trophic signalling pathways and overlap with autism

2018
PMCID: 5911435
PMID: 29681622
DOI: 10.1038/s41398-018-0136-4

[…] validated by Sanger sequencing using BigDye terminator chemistry 3.1 (ABI) and analysed using a 3730xl genetic analyzer (Applied Biosystems, Foster City, CA, USA). Sequencing data was analysed using DNASTAR Lasergene 10 Seqman Pro8 (DNASTAR, Inc. Madison, WI, USA). Validations were performed using genomic DNA isolated from whole blood where possible or alternatively, DNA extracted from LCLs. Wher […]

call_split

First record of the nematode Libyostrongylus dentatus Hoberg, Lloyd and Omar, 1995 (Trichostrongylidae) in ostriches (Struthio camelus Linnaeus, 1758) (Struthionidae) outside the Americas

2018
PMCID: 5899346
PMID: 29653600
DOI: 10.1186/s13071-018-2815-7
call_split See protocol

[…] DNA sequences were analyzed, edited and aligned using Pairwise/Blast/NCBI, DNASTAR Lasergene SeqMan v7.0.0, Bio Edit v7.2.5 [] and ClustalX version 2.0 []. ITS1 and ITS2 sequences were submitted to the GenBank database under the accession numbers KY991371- KY991373. The gene […]

library_books

Full Genome Sequencing Reveals New Southern African Territories Genotypes Bringing Us Closer to Understanding True Variability of Foot and Mouth Disease Virus in Africa

2018
Viruses
PMCID: 5923486
PMID: 29652800
DOI: 10.3390/v10040192

[…] Only contigs which matched the FMDV library after running a Basic Local Alignment Search Tool (BLAST) algorithm [] were assembled into consensus sequences using SeqMan Pro software implemented in the DNASTAR Lasergene 13 package (DNASTAR). To confirm the consensus, reads were mapped using Burrows-Wheeler Aligner (BWA) []. Mapped reads were visualised using Integrative Genomics Viewer (IGV) []. […]

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Analysis of DNAs associated with coconut foliar decay disease implicates a unique single stranded DNA virus representing a new taxon

2018
Sci Rep
PMCID: 5890292
PMID: 29632309
DOI: 10.1038/s41598-018-23739-y
call_split See protocol

[…] Sequences of cloned CFD DNAs were analysed with DNASTAR Lasergene, (v 12.1) (DNASTAR, Inc., Madison, WI). Consensus sequences of a given CFD DNA component were derived from at least three sequences of cloned DNA. Primary contigs (nodes) assembled b […]

library_books

Whole genome sequencing of a large collection of Myroides odoratimimus and Myroides odoratus isolates and antimicrobial susceptibility studies

2018
PMCID: 5884818
PMID: 29618738
DOI: 10.1038/s41426-018-0061-x

[…] arch parameters. A comparative analysis of the DNA sequences obtained was performed using the Molecular Evolutionary Genetics Analysis software package version 7. Protein sequences were created using DNASTAR Lasergene 14.0.10. (DNASTAR). Average nucleotide identity (ANI) values have been calculated on the whole-genome level using the software FastANI (https://github.com/ParBLiSS/FastANI) (TableĀ ). […]

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DNASTAR Lasergene institution(s)
DNASTAR, Madison, WI, USA

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