Online

An algorithm to peel the atoms of proteins as layers from periphery to center. Layers identifies residue transition pattern, which may be used for the comparison of folding pattern between two molecules. Besides, it also extracts molecular surfaces and protruding atoms at custom fineness by non-random sampling, which can be used for shape estimation and molecular surface comparison for protein recognition and ligand design.

User report

0 user reviews

0 user reviews

No review has been posted.

Layers forum

No open topic.

Layers classification

Layers specifications

Software type:
Package
Restrictions to use:
None
Computer skills:
Basic
Interface:
Web user interface
Input format:
PDB
Stability:
Stable

Layers support

Maintainer

Credits

Publications

Institution(s)

Advanced Technology Development Center, Indian Institute of Technology Kharagpur, Kharagpur, West Bengal, India; Computational Structural Biology Lab, Department of Biotechnology, Indian Institute of Technology Kharagpur, Kharagpur, West Bengal, India

By using OMICtools you acknowledge that you have read and accepted the terms of the end user license agreement.