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|Alternative name||The Laccase Engineering Database|
|Restrictions to use||None|
|Data access||File download, Browse|
|User data submission||Not allowed|
- person_outline Jurgen Pleiss
Publication for The Laccase Engineering Database
Highly Promiscuous Oxidases Discovered in the Bovine Rumen Microbiome
[…] proteins (COGs) using RPS-BLAST analysis against the COG database (e-values ≤ 10-8). A comparison was performed using BLASTP analysis against the Laccase and multicopper oxidase engineering database (LccED) (e-value < 10-8, identity ≥ 20%, and query length coverage ≥ 20%) (). The protein signatures were detected using the InterProScan web service ().Contig taxonomic assignment was carried out usin […]
The Rhizoctonia solani AG1 IB (isolate 7/3/14) transcriptome during interaction with the host plant lettuce (Lactuca sativa L.)
[…] settings. In addition, these genes were screened for CAZymes by applying dbCAN . For the identification of cytochrome p450 monooxygenase and multicopper oxidases, BioCatNet (biocatnet.de) CYPED and LccED databases provided by the University of Stuttgart (Stuttgart, Germany) were used. Finally, the Pathogen Host Interaction database (PHI-base) was used to find sequence homology in comparison with […]
Phylogenomic analyses reveal the diversity of laccase coding genes in Fonsecaea genomes
[…] ; a neighbor joining phylogenetic tree was determined using Clustal Omega (http://www.ebi.ac.uk/Tools/msa/clustalo/); 3) Putative laccases were extracted from the phylogenetic tree and compared to the Laccase Engineering Database  (LccED, http://www.lcced.uni-stuttgart.de) using BlastP e-value cutoff 1e-10. Positive hits for putative laccases found in Fonsecaea species were subjected to downs […]
Identification and characterization of laccase type multicopper oxidases involved in dye decolorization by the fungus Leptosphaerulina sp.
[…] r collision induced dissociation (CID) fragmentation. Mass spectra files were searched against Uniprot database (http://www.uniprot.org/) and The Laccase and multicopper oxidase Engineering Database (LccED, http://www.lcced.uni-stuttgart.de/cgi-bin/LccED1.2/index.pl) using SEQUEST through Proteome Discoverer (version 126.96.36.199). […]
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