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LCMS-2D specifications


Unique identifier OMICS_10871
Name LCMS-2D
Software type Package/Module
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Programming languages C
License GNU General Public License version 2.0
Computer skills Advanced
Stability No
Maintained No


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Publication for LCMS-2D

LCMS-2D citations


Review of Peak Detection Algorithms in Liquid Chromatography Mass Spectrometry

Curr Genomics
PMCID: 2766790
PMID: 20190954
DOI: 10.2174/138920209789177638

[…] advantage is that elution time processing first will reduce the noise level greatly and thus increase the accuracy of isotope pattern matching in the m/z dimension. note that algorithms such as lcms-2d still process lc data in a 1-d by 1-d fashion., lcms-2d [] processes lc/ms datasets in the lc dimension first and then in the m/z dimension. it claims that it performs 2-d processing […]


Comparison of public peak detection algorithms for MALDI mass spectrometry data analysis

BMC Bioinformatics
PMCID: 2631518
PMID: 19126200
DOI: 10.1186/1471-2105-10-4

[…] method, "p" denotes peak finding criterion and "-" means smoothing or baseline correction method is not used. cromwell, limpic, lms, cwt, and process are designed for single spectrum peak detection. lcms-2d, mapquant, msinspect, mzmine, openms and xcms are designed for lc-ms (liquid chromatography mass spectrometry) data analysis. prems is a gui (graphic user interface) package based […]

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LCMS-2D institution(s)
Albert Einstein College of Medicine, Bronx, NY, USA
LCMS-2D funding source(s)
NIH (CA101150 and CA103547)

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