LDAP specifications

Information


Unique identifier OMICS_13246
Name LDAP
Alternative name LncRNA-Disease Association Prediction
Interface Application programming interface
Restrictions to use None
Input data lncRNA sequence, multiple sequences
Input format FASTA, TXT
Output data Table with results of predicted disease with scores ranging from 0 to 1
Output format TXT
Computer skills Advanced
Stability No
Maintained No

Documentation


Maintainer


This tool is not available anymore.

Publication for LncRNA-Disease Association Prediction

LDAP citation

library_books

Long Noncoding RNA Identification: Comparing Machine Learning Based Tools for Long Noncoding Transcripts Discrimination

2016
Biomed Res Int
PMCID: 5153550
PMID: 28042575
DOI: 10.1155/2016/8496165

[…] ations even when diseases show no known related lncRNAs.Research [] has illustrated the lncRNA-disease association extensively and comprehensively. Basically, there are three approaches to performing lncRNA-disease association prediction []: to train a model based on machine learning algorithm; to construct a heterogeneous network; or to integrate lncRNA-miRNA interactions and miRNA-disease associ […]

LDAP institution(s)
School of Information Science and Engineering, Central South University, Changsha, China; Division of Biomedical Engineering, University of Saskatchewan, Saskatoon, Canada; Department of Computer Science, Georgia State University, Atlanta, GA, USA
LDAP funding source(s)
This work was supported in part by the National Natural Science Foundation of China No.61232001, No.61420106009 and No.61428209.

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