LDstore specifications

Information


Unique identifier OMICS_22204
Name LDstore
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input format BGEN,PLINK BED,BIM,FAM
Output data LD information between variants.
Output format BCOR
Operating system Unix/Linux
Computer skills Advanced
Version 1.1
Stability Stable
Maintained Yes

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Maintainers


  • person_outline Christian Benner <>
  • person_outline Christian Benner <>
  • person_outline Matti Pirinen <>

Publication for LDstore

LDstore institution(s)
Institute for Molecular Medicine Finland, University of Helsinki, Helsinki, Finland; Department of Public Health, University of Helsinki, Helsinki, Finland; National Institute for Health and Welfare, Helsinki, Finland; Center for Life-Course Health Research and Northern Finland Cohort Center, Biocenter Oulu, University of Oulu, Oulu, Finland; Faculty of Medicine, University of Oulu, Oulu, Finland; Unit of Primary Care, Oulu University Hospital, Oulu, Finland; Department of Epidemiology and Biostatistics, School of Public Health, Faculty of Medicine, Imperial College London, UK; Wellcome Trust Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridge, UK; Helsinki Institute for Information Technology and Department of Mathematics and Statistics, University of Helsinki, Helsinki, Finland
LDstore funding source(s)
Supported by the Doctoral Programme in Population Health and the Academy of Finland (257654, 288509, and 294050; 251217 and 255847); the Academy of Finland Center of Excellence for Complex Disease Genetics, EU FP7 project ENGAGE (201413), BioSHaRE (261433), the Finnish Foundation for Cardiovascular Research, Biocentrum Helsinki, and the Sigrid Juselius Foundation.

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