LFQC specifications

Information


Unique identifier OMICS_06078
Name LFQC
Software type Package/Module
Interface Command line interface
Restrictions to use Academic or non-commercial use
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes

Versioning


No version available

Maintainer


  • person_outline Sanguthevar Rajasekaran

Publication for LFQC

LFQC citation

library_books

ARSDA: A New Approach for Storing, Transmitting and Analyzing Transcriptomic Data

2017
PMCID: 5714481
PMID: 29079682
DOI: 10.1534/g3.117.300271

[…] 1536586, file size reduction efficiency is comparable between LFQC and FASTQ+ (). However, further compression with GZIP+FASTQ+ and LFQC+FASTQ+ both leads to much reduced file size than using GZIP or LFQC alone (), the same being true for the paired-end file SRR922270 (). Furthermore, FASTQ+ has one additional advantage in that it dramatically reduces computation time in downstream data analysis. […]

LFQC institution(s)
Department of Computer Science and Engineering, University of Connecticut, Storrs, CT, USA
LFQC funding source(s)
Supported in part by the following grants: NIH grant R01-LM010101 and NSF 1447711.

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