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Number of citations per year for the bioinformatics software tool LIB2NIST
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LIB2NIST specifications

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Unique identifier OMICS_26917
Name LIB2NIST
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Version 1.0.4.39
Stability Stable
Maintained Yes

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LIB2NIST citations

 (4)
library_books

LipidFrag: Improving reliability of in silico fragmentation of lipids and application to the Caenorhabditis elegans lipidome

2017
PLoS One
PMCID: 5344313
PMID: 28278196
DOI: 10.1371/journal.pone.0172311

[…] For comparison lipid annotations were performed using the LipidBlast in silico tandem MS library []. The provided LipidBlast fork (v2 Hiroshi Tsugawa fork) was downloaded and converted by Lib2NIST tool (v1.0.4.38 (beta), options: “Include Synonyms”: Yes, “MW from chem. formula”: Yes, “MS/MS spectra only”: Yes, “2008 MS Search compatible”: Yes) to NIST format and used as spectral librar […]

library_books

An in silico MS/MS library for automatic annotation of novel FAHFA lipids

2015
J Cheminform
PMCID: 4646931
PMID: 26579213
DOI: 10.1186/s13321-015-0104-4

[…] ChemAxon Marvin 9.5.3 and JChem Reactor 9.5.3 []. VBA code of LipidBlast was modified to fit the new template and export the spectra to NIST MSP format. MSP file was then converted to NIST library by Lib2NIST [] software and was ready to be used with NIST MS Search or NIST MS PepSearch software []. Other internal experimental MS/MS spectra as well as the external spectra from METLIN [] online data […]

library_books

LipidBlast Templates As Flexible Tools for Creating New in Silico Tandem Mass Spectral Libraries

2014
Anal Chem
PMCID: 4238643
PMID: 25340521
DOI: 10.1021/ac502511a

[…] l GlcADG adduct ions as well as observed GlcADG fragmentations. The associated VBA code was modified to allow the export of the GlcADG lipids. Tandem mass spectrometry MSP files were converted by the LIB2NIST program, and the resulting libraries were copied as a subdirectory into the NIST MS Search program. The libraries were then used to further validate MS/MS spectra using the NIST MS Search pro […]

library_books

Clinical Validation of a Highly Sensitive GC MS Platform for Routine Urine Drug Screening and Real Time Reporting of up to 212 Drugs

2013
PMCID: 3723246
PMID: 23935615
DOI: 10.1155/2013/329407

[…] n methanol solution were analyzed by the Automated Mass Spectral Deconvolution and Identification System (AMDIS) [–] in simple mode. An AMDIS-readable library of 212 drugs was compiled from using the Lib2NIST converter software version 1.0.0.13 included in the NIST MS-search software version 2.0a. For this, mass spectra for each of the 212 drugs were acquired by injecting 1 mg/mL of the drug in ne […]


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