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Citations per year

Number of citations per year for the bioinformatics software tool LIB2NIST

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This map represents all the scientific publications referring to LIB2NIST per scientific context
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LIB2NIST specifications


Unique identifier OMICS_26917
Software type Application/Script
Interface Command line interface
Restrictions to use None
Operating system Unix/Linux
Computer skills Advanced
Stability Stable
Maintained Yes




No version available

LIB2NIST citations


LipidFrag: Improving reliability of in silico fragmentation of lipids and application to the Caenorhabditis elegans lipidome

PLoS One
PMCID: 5344313
PMID: 28278196
DOI: 10.1371/journal.pone.0172311

[…] For comparison lipid annotations were performed using the LipidBlast in silico tandem MS library []. The provided LipidBlast fork (v2 Hiroshi Tsugawa fork) was downloaded and converted by Lib2NIST tool (v1.0.4.38 (beta), options: “Include Synonyms”: Yes, “MW from chem. formula”: Yes, “MS/MS spectra only”: Yes, “2008 MS Search compatible”: Yes) to NIST format and used as spectral librar […]


An in silico MS/MS library for automatic annotation of novel FAHFA lipids

J Cheminform
PMCID: 4646931
PMID: 26579213
DOI: 10.1186/s13321-015-0104-4

[…] ChemAxon Marvin 9.5.3 and JChem Reactor 9.5.3 []. VBA code of LipidBlast was modified to fit the new template and export the spectra to NIST MSP format. MSP file was then converted to NIST library by Lib2NIST [] software and was ready to be used with NIST MS Search or NIST MS PepSearch software []. Other internal experimental MS/MS spectra as well as the external spectra from METLIN [] online data […]


LipidBlast Templates As Flexible Tools for Creating New in Silico Tandem Mass Spectral Libraries

Anal Chem
PMCID: 4238643
PMID: 25340521
DOI: 10.1021/ac502511a

[…] l GlcADG adduct ions as well as observed GlcADG fragmentations. The associated VBA code was modified to allow the export of the GlcADG lipids. Tandem mass spectrometry MSP files were converted by the LIB2NIST program, and the resulting libraries were copied as a subdirectory into the NIST MS Search program. The libraries were then used to further validate MS/MS spectra using the NIST MS Search pro […]


Clinical Validation of a Highly Sensitive GC MS Platform for Routine Urine Drug Screening and Real Time Reporting of up to 212 Drugs

PMCID: 3723246
PMID: 23935615
DOI: 10.1155/2013/329407

[…] n methanol solution were analyzed by the Automated Mass Spectral Deconvolution and Identification System (AMDIS) [–] in simple mode. An AMDIS-readable library of 212 drugs was compiled from using the Lib2NIST converter software version included in the NIST MS-search software version 2.0a. For this, mass spectra for each of the 212 drugs were acquired by injecting 1 mg/mL of the drug in ne […]

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