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MIMAS / Multiomics Information Management and Annotation System
Facilitates and accelerates annotation of high-throughput expression profiling experiments. MIMAS provides life scientists with a highly flexible and focused GeneChip data storage and annotation platform essential for subsequent analysis and interpretation of experimental results with clustering and mining tools. It enables users to manage data from high-density oligonucleotide single nucleotide polymorphism (SNP) Chips, expression arrays (both 3'UTR and tiling) and promoter arrays, BeadArrays as well as Ultra High-Throughput DNA sequencing (UHTS) data using MIAME-compliant standardized vocabulary.
GNomEx / Genomic Experiment Data Repository and Core LIMS
A software solution that documents information about microarray and signature sequencing experimental parameters. GNomEx serves as both a data repository and as a laboratory information management system that records information relevant to all steps of the experimental process. Functionality of this software includes management of client and lab group information, ability for researchers to electronically submit and annotate experimental requests, workflow tracking of experimental processes, organization and distribution of experiment results and associated analysis, and electronic invoicing and billing capabilities.
caArray
An open-source, user-driven, role-based, web and programmatically accessible data management system. caArray guides the annotation and exchange of array data using a federated model of local installations whose results are sharable through integrated networks. Through such data services, caArray furthers translational cancer research through acquisition, dissemination and aggregation of semantically interoperable array data to support subsequent analysis by tools and services. As array technology advances and matures, caArray will extend its logical library of assay management.
BxArray
A web-based microarray data management and microarray analysis system for researchers who need to organize microarray data efficiently and get microarray data analyzed instantly. BxArrays supports all major microarray platforms, including Affymetrix, Agilent, NimbleGen, and more. BxArrays organizes microarray data into projects for online microarray analysis with predefined or custom procedures. BxArrays integrates with Gene Expression Omnibus (GEO) and allows instantaneous re-analysis of published microarray data.
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