Laboratory information and management systems | HTS
Challenges for sequencing facilities and small labs include tracking sequencing requests, individual samples, sample status throughout the sequencing process and the resultant data, including the interpretation of the results.
Consists of an annotable microarray data repository and analysis application. BASE is a Minimum Information About a Microarray Experiment (MIAME) guidelines compliant application. It features a web browser user interface, laboratory information management system (LIMS) for biomaterials and array production, annotations, hierarchical overview of analysis. It also integrates tools like MultiExperiment Viewer (MEV) and GenePattern.
Offers possibility to perform quality management and sample processing of next-generation sequencing (NGS) data and samples. Parkour LIMS is suited to maintain and simplify high quality and sample preparation in a next generation sequencing (NGS) environment. This tool is designed to facilitate automated sample processing and interaction with bioinformaticians through a variety of web APIs.
Offers a laboratory/knowledge management system. GeneInsight Suite is composed of GeneInsight (GI) Lab and GeneInsight Clinic. It enables organizations using GI Lab to communicate with organizations using GI Clinic. The tool can be used for laboratory information management systems and electronic health records. It was created to establish the networking components needed to cost-effectively and securely link together providers, laboratories, and other sources of curated genetic knowledge.