Reagent information management software systems | Synthetic biology
Laboratory stocks are the hardware of research. They must be stored and managed with mimimum loss of material and information. Plasmids, oligonucleotides and strains are regularly exchanged between collaborators within and between laboratories. Managing and sharing information about every item is crucial for retrieval of reagents, for planning experiments and for reproducing past experimental results.
An open-source information management system for biological laboratories. The system tracks information on all reagents within the laboratory, including specific properties of each reagent (i.e. sequences, external identifiers), and on all the physical preparations of these reagents (storage locations, physical characteristics). Complementing this repository are workflow tools, such as primer design and automated feature mapping, making OpenFreezer a valuable tool for the bench scientist.
Aims to support globally networked drug R&D. ScienceCloud provides an integrated suite of project-centered applications. This cloud-based workspace intends to leverage social communication and allows the: (i) capture and searches of user and application feeds; (ii) post from internal/external systems and; (iii) sharing of crowd knowledge. It also includes the Pipeline Pilot tool that implements standard business rules for partners and also creates and manages scientific protocols.
Helps you to manage your samples storage and keep track of the activity and aliquots. LabCollector is a modular software tool that you can adapt and customize extensively without any particular informatics skill. Therefore LabCollector LIMS can be used in a variety of different situations and labs. Easily create your own embedded custom modules, add any kind of fields, etc.
Allows the connection of all equipment available in a given laboratory. I-Collector intends to provide a unified graphic interface able to interact with a pre-existing laboratory information management system (LIMS) as well as to manage, organize and correct data related to patients. This program can be used in conjunction with a wide range of equipment including Roche Cobas series or Sysmex.
Manages equipments shared by a team or a complete lab. LabCal is an application allowing users to identify facilities that can be used in a specific time-slot, with a feature enabling their recurrent reservations. This application can be customized to define rules specific to users, equipments or rooms. It aims at optimizing team work and resources handling.
An open-source, extendable workflow management system for synthetic biology projects with entry points for oligos and larger DNA constructs and ending with sequence-verified clones. s. Parts are constructed through a series of unit operations. Each operation has well-defined characteristics: (i) input reagents; (ii) output products; (iii) status (e.g. pending, done); (iv) quality control metrics; (v) a protocol for converting the input to output and performing quality assessment and quality control.