LD Hub specifications

Unique identifier:
OMICS_13447
Software type:
Framework/Library
Restrictions to use:
None
Programming languages:
Python
Computer skills:
Advanced
Stability:
Stable
Maintained:
Yes
Name:
Linkage Disequilibrium Hub
Interface:
Command line interface
Operating system:
Unix/Linux
License:
GNU General Public License version 3.0
Version:
1.0.0
Requirements:
Argparse, Bitarray, Nose, Numpy, Pandas, Scipy

versioning

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LD Hub distribution

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LD Hub specifications

Unique identifier:
OMICS_13447
Interface:
Web user interface
Programming languages:
Python
Computer skills:
Basic
Stability:
Stable
Name:
Linkage Disequilibrium Hub
Restrictions to use:
None
License:
GNU General Public License version 3.0
Version:
1.2.2
Maintained:
Yes

LD Hub support

Documentation

Maintainer

  • Jie Zheng <>
  • Jie Zheng <>

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Credits

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Publications

Institution(s)

MRC Integrative Epidemiology Unit, University of Bristol, Oakfield House, Bristol, UK; Genetic Epidemiology Group, Department of Health Sciences, University of Leicester, Leicester, UK; University of Queensland Diamantina Institute, Translational Research Institute, Brisbane, QLD, Australia; Department of Epidemiology, Harvard T.H. Chan School of Public Health, Boston, MA, USA; Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA; Analytical and Translational Genetics Unit, Department of Medicine, Massachusetts General Hospital and Harvard Medical School, Boston, MA, USA

Funding source(s)

This work was supported by the Medical Research Council (MC_UU_12013/4 and MC_UU_12013/8), an Australian Research Council Future Fellowship (FT130101709), a Cancer Research UK programme grant number C18281/A19169 (the Integrative Cancer Epidemiology Programme), a Cancer Research UK Population Research Fellow (grant number C52724/A20138). It was also supported by the following grants: 1R01MH101244-02 (Statistical methods for studies of rare variants) and 1R01MH107649-01 (Methods for linking GWAS peaks to function in psychiatric disease).

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