Linked TCGA specifications

Information


Unique identifier OMICS_19002
Name Linked TCGA
Alternative name Linked Cancer Genome Atlas Database
Restrictions to use None
Database management system SPARQL
Community driven No
Data access Browse
User data submission Not allowed
Maintained Yes

Maintainers


  • person_outline Shanmukha Padmanabhuni
  • person_outline Stefan Decker

Additional information


http://publicationslist.org/data/muhammad-saleem/ref-2/Linked%20TCGA-I-Semantics2013-final.pdf

Linked TCGA citations

 (2)
library_books

MediSyn: uncertainty aware visualization of multiple biomedical datasets to support drug treatment selection

2017
BMC Bioinformatics
PMCID: 5606218
PMID: 28929971
DOI: 10.1186/s12859-017-1785-7

[…] To facilitate knowledge discovery from dispersed and heterogeneous biomedical datasets, some projects, such as Linked TCGA (The Cancer Genome Atlas Database) [] and Open PHACTS [], brought together pharmacological data resources and built data infrastructures to allow for the integration and interoperation of […]

library_books

TopFed: TCGA tailored federated query processing and linking to LOD

2014
J Biomed Semantics
PMCID: 4417511
PMID: 25937882
DOI: 10.1186/2041-1480-5-47

[…] et cancer treatment, mechanism-based cancer treatment, and survival outcome, where the Linked Data approach of integrating TCGA data was used. More recently, a visualization of the integration of the Linked TCGA cancer data with PubMed publications is presented in [, ]. The main aim behind this work is to foster serendipity through big data RDFization, continuous integration, and visualization. Ge […]

Linked TCGA reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review Linked TCGA