LIP specifications


Unique identifier OMICS_08517
Name LIP
Alternative name Loops In Proteins
Restrictions to use None
Maintained Yes


  • person_outline LIP Team

Publication for Loops In Proteins

LIP citation


Convergent evolution in structural elements of proteins investigated using cross profile analysis

BMC Bioinformatics
PMCID: 3398312
PMID: 22244085
DOI: 10.1186/1471-2105-13-11

[…] f cluster #313 in Table (and also to that of #147 in Table ). The profile derived from cluster #366 showed strong correlation with 14 sequence profiles of segments corresponding to Ca2+-coordinating loops in proteins of the EF-hand superfamily (SCOP ID: a.39.1). The 12 clusters of 15-residue-long segments show correlation with a more diverse set of proteins (Table ) than was the case for the clus […]

LIP institution(s)
BCB (Berlin Center for Genome-based Bioinformatics) at the Institute of Biochemistry, Charité (Medical Faculty of the Humboldt University Berlin), Berlin, Germany

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