LiSiCA statistics

info info

Citations per year

info

Popular tool citations

chevron_left Ligand-based virtual screening chevron_right
info

Tool usage distribution map

Tool usage distribution map
info info

Associated diseases

Associated diseases
Want to access the full stats & trends on this tool?

LiSiCA specifications

Information


Unique identifier OMICS_24925
Name LiSiCA
Alternative name Ligand Similarity using Clique Algorithm
Software type Application/Script
Interface Command line interface
Restrictions to use None
Input data A reference and the target compound files.
Input format MOL2
Operating system Unix/Linux, Mac OS, Windows
Computer skills Advanced
Version 1.0.1
Stability Stable
Source code URL http://insilab.org/files/lisica/archive.zip
Maintained Yes

Download


download.png
download.png
download.png
download.png

Versioning


No version available

Maintainers


  • person_outline Dusanka Janezic
  • person_outline Janez Konc

Publication for Ligand Similarity using Clique Algorithm

LiSiCA citations

 (4)
library_books

Trypanocidal Effect of Isotretinoin through the Inhibition of Polyamine and Amino Acid Transporters in Trypanosoma cruzi

2017
PLoS Negl Trop Dis
PMCID: 5371382
PMID: 28306713
DOI: 10.1371/journal.pntd.0005472

[…] in a database that comprises a total of 2924 worldwide commercially available drugs and nutraceuticals approved by u.s. food and drug administration (fda). this screening was performed using lisica v1.0 (ligand similarity using clique algorithm) software [], and similarities were expressed using the tanimoto coefficient []. the structural data of compounds retrieved from similarity […]

library_books

Development and the initial validation of a new self administered questionnaire for an early detection of health status changes in smokers at risk for chronic obstructive pulmonary disease (MARKO questionnaire)

2016
PMCID: 5141460
PMID: 27815933
DOI: 10.3325/cmj.2016.57.425

[…] office, zagreb, croatia; dubravka margaretić, md, general practitioner’s office, osijek, croatia; ines balint, md, general practitioner’s office, strmec samoborski, croatia; assoc.prof. ines diminić lisica, md, phd, family physician’s office, rijeka, croatia; ivana boban, md, general practitioner’s office, split, croatia; jadranka radman, md, general practitioner’s office, split, croatia; jasna […]

library_books

Ligand based virtual screening interface between PyMOL and LiSiCA

2016
J Cheminform
PMCID: 5013575
PMID: 27606012
DOI: 10.1186/s13321-016-0157-z

[…] the potential to increase the structural variability of compounds. here, we present an interface between the popular molecular graphics system pymol and the ligand-based virtual screening software lisica available at http://insilab.org/lisica-plugin and demonstrate how this interface can be used in the early stages of drug discovery process.graphical abstract, virtual screening (vs) of large […]

library_books

Direct Characterization of Transcription Elongation by RNA Polymerase I

2016
PLoS One
PMCID: 4959687
PMID: 27455049
DOI: 10.1371/journal.pone.0159527

[…] this experimental setup, both our measurement and the estimate by viktorovskaya et al. [] yield an in vitro average elongation rate of 18–20 nt/s. a recent in vitro study using optical tweezers by lisica et al. [] reported, instead, a similar average and maximum elongation rate (~32 nt/s and ~39 nt/s, respectively). their experimental conditions differed from those used in our work […]


Want to access the full list of citations?
LiSiCA institution(s)
National Institute of Chemistry, Ljubljana, Slovenia; Faculty of Mathematics, Natural Sciences and Information Technologies, University of Primorska, Koper, Slovenia; Faculty of Pharmacy, University of Ljubljana, Ljubljana, Slovenia

LiSiCA reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review LiSiCA