LiSiCA statistics

info info

Citations per year


Popular tool citations

chevron_left Ligand-based virtual screening chevron_right

Tool usage distribution map

Tool usage distribution map
info info

Associated diseases

Associated diseases
Want to access the full stats & trends on this tool?

LiSiCA specifications


Unique identifier OMICS_24925
Name LiSiCA
Alternative name Ligand Similarity using Clique Algorithm
Software type Application/Script
Interface Command line interface
Restrictions to use None
Input data A reference and the target compound files.
Input format MOL2
Operating system Unix/Linux, Mac OS, Windows
Computer skills Advanced
Version 1.0.1
Stability Stable
Source code URL
Maintained Yes




No version available


  • person_outline Dusanka Janezic
  • person_outline Janez Konc

Publication for Ligand Similarity using Clique Algorithm

LiSiCA citations


Trypanocidal Effect of Isotretinoin through the Inhibition of Polyamine and Amino Acid Transporters in Trypanosoma cruzi

PLoS Negl Trop Dis
PMCID: 5371382
PMID: 28306713
DOI: 10.1371/journal.pntd.0005472

[…] in a database that comprises a total of 2924 worldwide commercially available drugs and nutraceuticals approved by u.s. food and drug administration (fda). this screening was performed using lisica v1.0 (ligand similarity using clique algorithm) software [], and similarities were expressed using the tanimoto coefficient []. the structural data of compounds retrieved from similarity […]


Development and the initial validation of a new self administered questionnaire for an early detection of health status changes in smokers at risk for chronic obstructive pulmonary disease (MARKO questionnaire)

PMCID: 5141460
PMID: 27815933
DOI: 10.3325/cmj.2016.57.425

[…] office, zagreb, croatia; dubravka margaretić, md, general practitioner’s office, osijek, croatia; ines balint, md, general practitioner’s office, strmec samoborski, croatia; ines diminić lisica, md, phd, family physician’s office, rijeka, croatia; ivana boban, md, general practitioner’s office, split, croatia; jadranka radman, md, general practitioner’s office, split, croatia; jasna […]


Ligand based virtual screening interface between PyMOL and LiSiCA

J Cheminform
PMCID: 5013575
PMID: 27606012
DOI: 10.1186/s13321-016-0157-z

[…] the potential to increase the structural variability of compounds. here, we present an interface between the popular molecular graphics system pymol and the ligand-based virtual screening software lisica available at and demonstrate how this interface can be used in the early stages of drug discovery process.graphical abstract, virtual screening (vs) of large […]


Direct Characterization of Transcription Elongation by RNA Polymerase I

PLoS One
PMCID: 4959687
PMID: 27455049
DOI: 10.1371/journal.pone.0159527

[…] this experimental setup, both our measurement and the estimate by viktorovskaya et al. [] yield an in vitro average elongation rate of 18–20 nt/s. a recent in vitro study using optical tweezers by lisica et al. [] reported, instead, a similar average and maximum elongation rate (~32 nt/s and ~39 nt/s, respectively). their experimental conditions differed from those used in our work […]

Want to access the full list of citations?
LiSiCA institution(s)
National Institute of Chemistry, Ljubljana, Slovenia; Faculty of Mathematics, Natural Sciences and Information Technologies, University of Primorska, Koper, Slovenia; Faculty of Pharmacy, University of Ljubljana, Ljubljana, Slovenia

LiSiCA reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review LiSiCA