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- Homo sapiens
Publication for lnCeDB
Molecular Network Based Identification of Competing Endogenous RNAs in Thyroid Carcinoma
[…] RNAs in human Cancers dbDEMC . In addition, miRNA-target interaction databases including miRcode  and miRanda [,,,,,,,], and ceRNA databases such as long non-coding competing endogenous database (lnCeDB)  have been developed, which provide much useful information.In this study, we develop a novel pipeline called Molecular Network-based Identification of ceRNA (MNIceRNA) to identify ceRNAs in […]
Long Non coding RNA in Neurons: New Players in Early Response to BDNF Stimulation
[…] Visualization, and Integrated Discovery), which uses Gene Ontology (GO) to identify the molecular function represented in the gene profile (). We obtained a list of potentially regulated miRNAs from lnCeDB, a database that provides human lncRNAs (version Gencode 19) that can potentially act as competitive endogenous RNAs (ceRNAs) and interfere with the pathway of miRNAs (). These miRNAs were anal […]
Identification of lncRNA associated competing triplets reveals global patterns and prognostic markers for cancer
[…] d the hypergeometric test method, starBase v.2.0 applies ceRNAFunction web tools to predict the function of ncRNAs and provides Pan-Cancer ceRNA networks (). Another lncRNA-associated ceRNA database, lnCeDB, provides tissue-specific information on ceRNAs but contains only a small number of AGO CLIP-supported interactions (). The cross-species ceRNA database HumanViCe has been established to invest […]
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