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LncRNADisease specifications

Information


Unique identifier OMICS_06100
Name LncRNADisease
Restrictions to use None
Community driven No
Data access File download, Browse
User data submission Not allowed
Maintained No

Taxon


  • Primates
    • Homo sapiens

Maintainers


This tool is not available anymore.

Publications for LncRNADisease

LncRNADisease citations

 (11)
library_books

Prediction of microRNA disease associations based on distance correlation set

2018
BMC Bioinformatics
PMCID: 5905221
PMID: 29665774
DOI: 10.1186/s12859-018-2146-x

[…] In the abovementioned computational models, known miRNA-disease associations are required. However, few lncRNA-disease associations have been recorded in several biological datasets, such as MNDR and LncRNADisease [, ], and several studies have shown that lncRNA-miRNA associations are involved in and associated with human diseases [–]. Thus, in this article, a new model based on the Distance Corre […]

library_books

Molecular Network Based Identification of Competing Endogenous RNAs in Thyroid Carcinoma

2018
Genes
PMCID: 5793195
PMID: 29351231
DOI: 10.3390/genes9010044

[…] fficult to build the exact ceRNA network and use it to understand RNA competing mechanisms. Fortunately, there are many well-established RNA databases such as long-non-coding RNA-associated diseases (LncRNADisease) database [], the Human miRNA Disease Database (HMDD) [], and database of Differentially Expressed MiRNAs in human Cancers dbDEMC []. In addition, miRNA-target interaction databases incl […]

library_books

Stable solution to l2,1 based robust inductive matrix completion and its application in linking long noncoding RNAs to human diseases

2017
BMC Med Genomics
PMCID: 5751820
PMID: 29297358
DOI: 10.1186/s12920-017-0310-1

[…] d the lincRNA-disease inference problem. Due to the complexities in the relationship and the available datasets, only a small number of experimentally validated associations have been reported in the lncRNAdisease database []. Therefore, using multiple complementary data sources in the algorithm is important to predict potential lincRNA and disease associations. For example, LRLSLDA [], K-RWRH [], […]

library_books

Long non coding RNAs may serve as biomarkers in breast cancer combined with primary lung cancer

2017
Oncotarget
PMCID: 5601645
PMID: 28938549
DOI: 10.18632/oncotarget.17356

[…] ppi Medical Center. There were a total of 192 lncRNAs associated with cancer in plate 1 and plate 2. LncRNAs in plate 1 were from lncRNAdb (http://www.lncrnadb.org/). LncRNAs in plate 2 were from the lncRNAdisease (http://www.cuilab.cn/lncrnadisease).Total RNA was isolated from samples tissues by using RecoverAllTM Total Nucleic Acid isolation kit for FFPE according to factory protocol. RNA purity […]

library_books

Present Scenario of Long Non Coding RNAs in Plants

2017
Noncoding RNA
PMCID: 5831932
PMID: 29657289
DOI: 10.3390/ncrna3020016

[…] lable to identify, study, and compare lncRNAs in humans and understand the roles of these long RNA species in several diseases, for example, LNCipedia [], lncRNome [], Co-lncRNA [], starBase v2.0 [], lncRNADisease [], lnc2Cancer [], etc. For comparative evaluation of these emerging tools, please refer to reviews by Fritah et al., Jalali et al., and Yotsukura et al. [,,].Interestingly, GmENOD40, a […]

library_books

LncRNAs: From Basic Research to Medical Application

2017
PMCID: 5370437
PMID: 28367094
DOI: 10.7150/ijbs.16968

[…] Now the version has been updated to NONCODE v4 . LNCipedia (http://www.lncipedia.org) provides the sequence and full comments on structures of human lncRNAs-. LncRNA disease (http://cmbi.bjmu.edu.cn/lncrnadisease) provides full comments of reported disease-related lncRNAs. NRED (http://jsm-research.imb.uq.edu.au/nred/) provides the lncRNA expression information of human and mouse based on chip da […]


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LncRNADisease institution(s)
Shanghai Key Laboratory of Regulatory Biology, Institute of Biomedical Sciences, School of Life Sciences, East China Normal University, Shanghai, China; Department of Biomedical Informatics, School of Basic Medical Sciences, MOE Key Lab of Cardiovascular Sciences, Center for Noncoding RNA Medicine, Peking University, Beijing, China; Institute of Biomedical Sciences, Fudan University, Shanghai, China; Center of Bioinformatics, Key Laboratory for Neuro-Information of Ministry of Education, School of Life Science and Technology, University of Electronic Science and Technology of China, Chengdu, China
LncRNADisease funding source(s)
Supported by the Special Project on Precision Medicine under the National Key R&D Program [2016YFC0903003]; National Natural Science Foundation of China [31200956, 81670462].

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