lncRNASNP statistics

Tool stats & trends

Looking to identify usage trends or leading experts?

lncRNASNP specifications

Information


Unique identifier OMICS_06099
Name lncRNASNP
Alternative name lncRNASNP2
Restrictions to use None
Community driven No
Data access File download, Browse
Maintained Yes

Taxon


  • Primates
    • Homo sapiens
  • Rodents
    • Mus musculus

Maintainers


  • person_outline An-Yuan Guo
  • person_outline An-Yuan Guo
  • person_outline Wei Liu

Publications for lncRNASNP

lncRNASNP citations

 (4)
library_books

The lncRNA myocardial infarction associated transcript centric competing endogenous RNA network in non small cell lung cancer

2018
PMCID: 5958945
DOI: 10.2147/CMAR.S163395

[…] We focused on SNP rs1061541 of lncRNA MIAT according to lncRNASNP (a database of functional SNPs in lncRNAs, http://bioinfo.life.hust.edu.cn/lncRNASNP/). The secondary structure of MIAT transcripts is changed by rs1061541 polymorphisms and illustrated by t […]

library_books

Secondary structure impacts patterns of selection in human lncRNAs

2016
BMC Biol
PMCID: 4960838
PMID: 27457204
DOI: 10.1186/s12915-016-0283-0

[…] motif using the same experimentally confirmed set as Schüler et al. [], and we did the same analyses as with the whole data sets. We also retrieved the minimal Gibbs free energy (∆G) as calculated in lncRNASNP for H. sapiens lncRNA []. For each lncRNA, the database provides the secondary structure and the minimum free energy (∆G) of the folded reference transcript sequence and that obtained after […]

library_books

Long non coding RNA Databases in Cardiovascular Research

2016
PMCID: 4996844
PMID: 27049585
DOI: 10.1016/j.gpb.2016.03.001

[…] DNA, and other RNA types, especially miRNAs. Finally, genomic variations within the lncRNA gene sequence can be analyzed to explore their potential functional influence on the lncRNA transcript using lncRNASNP . […]

library_books

The 2015 Nucleic Acids Research Database Issue and Molecular Biology Database Collection

2014
Nucleic Acids Res
PMCID: 4383995
PMID: 25593347
DOI: 10.1093/nar/gku1241

[…] h are presented as separate papers in this issue. The growing interest in lncRNAs led to the inclusion, in addition to an update on lncRNAdb (), of four other lncRNA-related databases: LncRNA2Target, lncRNASNP, LNCipedia, and LncRNAWiki. The last is structured as wiki, attempting to encourage community annotation, as advocated in the 2012 NAR editorial by Finn and colleagues ().The protein databas […]

Citations

Looking to check out a full list of citations?

lncRNASNP institution(s)
Department of Bioinformatics and Systems Biology, Key Laboratory of Molecular Biophysics of the Ministry of Education, Hubei Bioinformatics and Molecular Imaging Key Laboratory, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan, China
lncRNASNP funding source(s)
Supported by National Natural Science Foundation of China (NSFC) [31471247, 31771458].

lncRNASNP reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review lncRNASNP