LOCALIZER specifications

Unique identifier:
OMICS_14252
Restrictions to use:
None
Input format:
FASTA
Output format:
TXT
License:
GNU General Public License version 3.0
Version:
1.0
Maintained:
Yes
Interface:
Web user interface
Input data:
Full plant or effector proteins sequences
Output data:
A summary table, predictions (chloroplast, mitochondria or nucleus) for each submitted protein
Programming languages:
Python
Computer skills:
Basic
Stability:
Stable
  • Plants

LOCALIZER specifications

Unique identifier:
OMICS_14252
Interface:
Command line interface
Input data:
Full plant or effector proteins sequences
Output data:
A summary table, predictions (chloroplast, mitochondria or nucleus) for each submitted protein
Operating system:
Unix/Linux
License:
GNU General Public License version 3.0
Version:
1.0
Requirements:
pepstats, WEKA, Perl, BioPython
Software type:
Package/Module
Restrictions to use:
None
Input format:
FASTA
Output format:
TXT
Programming languages:
Python
Computer skills:
Advanced
Stability:
Stable
Maintained:
Yes
  • Plants

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LOCALIZER support

Documentation

Maintainer

  • Jana Sperschneider <>
  • Jana Sperschneider <>

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Publications

Institution(s)

Centre for Environment and Life Sciences, CSIRO Agriculture and Food, Perth, WA, Australia; Division of Plant Sciences, Research School of Biology, The Australian National University, Acton, ACT, Australia; The UWA Institute of Agriculture, The University of Western Australia, Crawley, WA, Australia; The Sainsbury Laboratory, Norwich Research Park, Norwich, UK; Queensland Bioscience Precinct, CSIRO Agriculture and Food, Brisbane, QLD, Australia; Black Mountain Laboratories, CSIRO Agriculture and Food, Canberra, ACT, Australia

Funding source(s)

OCE Postdoctoral Fellowship

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