LOCALIZER specifications

Information


Unique identifier OMICS_14252
Name LOCALIZER
Interface Web user interface
Restrictions to use None
Input data Full plant or effector proteins sequences
Input format FASTA
Output data A summary table, predictions (chloroplast, mitochondria or nucleus) for each submitted protein
Output format TXT
Programming languages Python
License GNU General Public License version 3.0
Computer skills Basic
Version 1.0
Stability Stable
Maintained Yes

Documentation


Maintainer


  • person_outline Jana Sperschneider <>

Information


Unique identifier OMICS_14252
Name LOCALIZER
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data Full plant or effector proteins sequences
Input format FASTA
Output data A summary table, predictions (chloroplast, mitochondria or nucleus) for each submitted protein
Output format TXT
Operating system Unix/Linux
Programming languages Python
License GNU General Public License version 3.0
Computer skills Advanced
Version 1.0
Stability Stable
Requirements pepstats, WEKA, Perl, BioPython
Maintained Yes

Versioning


Add your version

Documentation


Maintainer


  • person_outline Jana Sperschneider <>

Publication for LOCALIZER

LOCALIZER institution(s)
Centre for Environment and Life Sciences, CSIRO Agriculture and Food, Perth, WA, Australia; Division of Plant Sciences, Research School of Biology, The Australian National University, Acton, ACT, Australia; The UWA Institute of Agriculture, The University of Western Australia, Crawley, WA, Australia; The Sainsbury Laboratory, Norwich Research Park, Norwich, UK; Queensland Bioscience Precinct, CSIRO Agriculture and Food, Brisbane, QLD, Australia; Black Mountain Laboratories, CSIRO Agriculture and Food, Canberra, ACT, Australia
LOCALIZER funding source(s)
OCE Postdoctoral Fellowship

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