lodGWAS specifications


Unique identifier OMICS_11090
Name lodGWAS
Software type Package/Module
Interface Command line interface
Restrictions to use None
Input data The genomic data, either genotyped and/or imputed, should be provided in dosage format, which contains more information than the best-guess genotype format. lodGWAS is capable of handling all three commonly used dosage formats, as it will automatically recognize whether there is one (dosage), two (two-probabilities), or three (three-probabilities) columns of data per individual.
Operating system Unix/Linux, Mac OS, Windows
Programming languages R
License GNU General Public License version 3.0
Computer skills Advanced
Version 1.0-7
Stability Stable
Maintained Yes


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  • person_outline Ilja Nolte <>

Publication for lodGWAS

lodGWAS institution(s)
Department of Epidemiology, University of Groningen, University Medical Center Groningen, Groningen, Netherlands; School of Medicine, Isfahan University of Medical Sciences, Isfahan, Iran; Department of Mathematics and Computer Science, Eindhoven University of Technology, Eindhoven, Netherlands

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