LongTarget statistics

To access cutting-edge analytics on consensus tools, life science contexts and associated fields, you will need to subscribe to our premium service.

Subscribe
info

Citations per year

Citations chart
info

Popular tool citations

chevron_left LncRNA prediction chevron_right
Popular tools chart
info

Tool usage distribution map

Tool usage distribution map
info

Associated diseases

Associated diseases

LongTarget specifications

Information


Unique identifier OMICS_06105
Name LongTarget
Interface Web user interface
Restrictions to use None
Computer skills Basic
Stability Stable
Maintained Yes

Publication for LongTarget

LongTarget in publications

 (3)
PMCID: 5833400
PMID: 29445134
DOI: 10.1038/s41419-018-0275-9

[…] was used to predict the rnabinding protein that could bind to foxd2-as1. the website is http://pridb.gdcb.iastate.edu/rpiseq/rpintdb.html. the foxd2-as1 dna-binding domain was identified with longtarget, built by zhu h from southern medical university. the website is http://lncrna.smu.edu.cn/show/dnatriplex. the e2f1 binding sites of the foxd2-as1 promoter were predicted using the jaspar […]

PMCID: 5509713
PMID: 28706206
DOI: 10.1038/s41598-017-02561-y

[…] szcześniak and collaborators predicted a large number of lncrna-rna interactions in human transcriptome using a similarity-search method. as an alternative, he et al. developed a tool named longtarget to predict lncrna-dna interactions via base-pairing analysis. in our present study, we initially investigated the content of lncrnas and the pattern of expression in the transcriptomes […]

PMCID: 5502368
DOI: 10.1093/database/bax042

[…] lncrna functionality. other, non-enrichment-based approaches to characterize lncrna functionality include e.g. transcription factor binding (tf2lncrna) (), lncrna/protein and lncrna/dna binding (longtarget) (), differential mrna expression upon lncrna modulation (lncrna2target) () or a combination of lncrna expression, sequence conservation, coding potential and secondary structure formation […]


To access a full list of publications, you will need to upgrade to our premium service.

LongTarget institution(s)
Bioinformatics Section, School of Basic Medical Sciences and Network Center, Southern Medical University, Guangzhou, China

LongTarget reviews

star_border star_border star_border star_border star_border
star star star star star

Be the first to review LongTarget